Know More About Genoma

The Genoma SARS-CoV-2 database was developed in order to bring together detailed information on SARS-CoV-2 genome variations associated with phylogeographic distribution, Virus evolution and transmission. The database is manually curated and we aim to replanish it on the regular basis. For more details about the variant calling process and data filtration, please refer to the Variant Calling Pipeline. Currently the database contains genomic information on 3065 SARS-CoV-2 Isolates from different databases (GISAID and NCBI) and integrates genomic, epidemiological and transmission description with genome variations based on whole genome sequencing data. This version is still developing, that is why we will be happy to hear any comments or suggestions. If you think you've found a bug, please contact us.

SARS-CoV-2
DATABASE

Genomes by location

SARS-CoV-2 genomes distribution around
the world

Africa

35

Europe

2261

Asia 

422

America

842

Austrlia 

80

Genoma CoV2 database

Search Genoma CoV2 database in a variety of ways by choosing a sample characteristics, or selecting a specific gene or genome region. The type of a report will look different depending on chosen restrictions. you can download all the data by clicking on the link bellow.

DOWNLOAD DATABASE

782

Variations number

512

Non Synonymous Variants

222

Synonymous Variants

4

Deletions

Meet the Team

Pr.Azeddine Ibrahimi

Team leader

Meriem Laamarti

Ph.D student

Tarek Alouane

Ph.D student

Souad Kartti

Ph.D student

Chemao-elfihri M.walid

Ph.D student

Mohammed Hakmi

Ph.D student

Abdelmouneem Essabar

Ph.D student

Mohamed Laamarti

Computer Science Engineer

Haitam Hlali

Computer Science Engineer